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debian-mirror-gitlab/doc/install/database_mysql.md
Sruthi Chandran 62c4265d29 New upstream version 11.7.5
2019-02-13 22:33:31 +05:30

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Database MySQL

NOTE: Note: We do not recommend using MySQL due to various issues. For example, there have been bugs with case (in)sensitivity.

Bugs relating to case sensitivity:

Initial database setup

# Install the database packages
sudo apt-get install -y mysql-server mysql-client libmysqlclient-dev

# Ensure you have MySQL version 5.6 or later
mysql --version

# Pick a MySQL root password (can be anything), type it and press enter
# Retype the MySQL root password and press enter

# Secure your installation
sudo mysql_secure_installation

# Login to MySQL
mysql -u root -p

# Type the MySQL root password

# Create a user for GitLab
# do not type the 'mysql>', this is part of the prompt
# change $password in the command below to a real password you pick
mysql> CREATE USER 'git'@'localhost' IDENTIFIED BY '$password';

# Ensure you can use the InnoDB engine which is necessary to support long indexes
# If this fails, check your MySQL config files (e.g. `/etc/mysql/*.cnf`, `/etc/mysql/conf.d/*`) for the setting "innodb = off"
mysql> SET storage_engine=INNODB;

# If you have MySQL < 5.7.7 and want to enable utf8mb4 character set support with your GitLab install, you must set the following NOW:
mysql> SET GLOBAL innodb_file_per_table=1, innodb_file_format=Barracuda, innodb_large_prefix=1;

# If you use MySQL with replication, or just have MySQL configured with binary logging, you need to run the following to allow the use of `TRIGGER`:
mysql> SET GLOBAL log_bin_trust_function_creators = 1;

# Create the GitLab production database
mysql> CREATE DATABASE IF NOT EXISTS `gitlabhq_production` DEFAULT CHARACTER SET `utf8` COLLATE `utf8_general_ci`;

# Grant the GitLab user necessary permissions on the database
mysql> GRANT SELECT, INSERT, UPDATE, DELETE, CREATE, CREATE TEMPORARY TABLES, DROP, INDEX, ALTER, LOCK TABLES, REFERENCES, TRIGGER ON `gitlabhq_production`.* TO 'git'@'localhost';

# Quit the database session
mysql> \q

# Try connecting to the new database with the new user
sudo -u git -H mysql -u git -p -D gitlabhq_production

# Type the password you replaced $password with earlier

# You should now see a 'mysql>' prompt

# Quit the database session
mysql> \q

You are done installing the database for now and can go back to the rest of the installation. Please proceed to the rest of the installation before running through the steps below.

log_bin_trust_function_creators

If you use MySQL with replication, or just have MySQL configured with binary logging, all of your MySQL servers will need to have log_bin_trust_function_creators enabled to allow the use of TRIGGER in migrations. You have already set this global variable in the steps above, but to make it persistent, add the following to your my.cnf file:

log_bin_trust_function_creators=1

MySQL utf8mb4 support

After installation or upgrade, remember to convert any new tables to utf8mb4/utf8mb4_general_ci.

GitLab 8.14 has introduced a feature requiring utf8mb4 encoding to be supported in your GitLab MySQL Database, which is not the case if you have set up your database before GitLab 8.16.

Follow the below instructions to ensure you use the most up to date requirements for your GitLab MySQL Database.

We are about to do the following:

  • Ensure you can enable utf8mb4 encoding and utf8mb4_general_ci collation for your GitLab DB, tables and data.
  • Convert your GitLab tables and data from utf8/utf8_general_ci to utf8mb4/utf8mb4_general_ci.

Check for utf8mb4 support

Check for InnoDB File-Per-Table Tablespaces

We need to check, enable and maybe convert your existing GitLab DB tables to the InnoDB File-Per-Table Tablespaces as a prerequisite for supporting utfb8mb4 with long indexes required by recent GitLab databases.

# Login to MySQL
mysql -u root -p

# Type the MySQL root password
mysql > use gitlabhq_production;

# Check your MySQL version is >= 5.5.3 (GitLab requires 5.5.14+)
mysql > SHOW VARIABLES LIKE 'version';
+---------------+-----------------+
| Variable_name | Value           |
+---------------+-----------------+
| version       | 5.5.53-0+deb8u1 |
+---------------+-----------------+

# Note where is your MySQL data dir for later:
mysql > select @@datadir;
+----------------+
| @@datadir      |
+----------------+
| /var/lib/mysql |
+----------------+

# Note whether your MySQL server runs with innodb_file_per_table ON or OFF:
mysql> SELECT @@innodb_file_per_table;
+-------------------------+
| @@innodb_file_per_table |
+-------------------------+
|                       1 |
+-------------------------+

# You can now quit the database session
mysql> \q

You need MySQL 5.5.3 or later to perform this update.

Whatever the results of your checks above, we now need to check if your GitLab database has been created using InnoDB File-Per-Table Tablespaces (i.e. innodb_file_per_table was set to 1 at initial setup time).

NOTE: Note: This setting is enabled by default since MySQL 5.6.6.

# Run this command with root privileges, replace the data dir if different:
sudo ls -lh /var/lib/mysql/gitlabhq_production/*.ibd | wc -l

# Run this command with root privileges, replace the data dir if different:
sudo ls -lh /var/lib/mysql/gitlabhq_production/*.frm | wc -l
  • Case 1: a result > 0 for both commands

Congratulations, your GitLab database uses the right InnoDB tablespace format.

However, you must still ensure that any future tables created by GitLab will still use the right format:

  • If SELECT @@innodb_file_per_table returned 1 previously, your server is running correctly.

    It's however a requirement to check now that this setting is indeed persisted in your my.cnf file!

  • If SELECT @@innodb_file_per_table returned 0 previously, your server is not running correctly.

    Enable innodb_file_per_table by running in a MySQL session as root the command SET GLOBAL innodb_file_per_table=1, innodb_file_format=Barracuda; and persist the two settings in your my.cnf file.

Now, if you have a different result returned by the 2 commands above, it means you have a mix of tables format uses in your GitLab database. This can happen if your MySQL server had different values for innodb_file_per_table in its life and you updated GitLab at different moments with those inconsistent values. So keep reading.

  • Case 2: a result equals to "0" OR not the same result for both commands

Unfortunately, none or only some of your GitLab database tables use the GitLab requirement of InnoDB File-Per-Table Tablespaces.

Let's enable what we need on the running server:

# Login to MySQL
mysql -u root -p

# Type the MySQL root password

# Enable innodb_file_per_table and set innodb_file_format on the running server:
mysql > SET GLOBAL innodb_file_per_table=1, innodb_file_format=Barracuda;

# You can now quit the database session
mysql> \q

Now, persist innodb_file_per_table and innodb_file_format in your my.cnf file.

Ensure at this stage that your GitLab instance is indeed stopped.

Now, let's convert all the GitLab database tables to the new tablespace format:

# Login to MySQL
mysql -u root -p

# Type the MySQL root password
mysql > use gitlabhq_production;

# Safety check: you should still have those values set as follows:
mysql> SELECT @@innodb_file_per_table, @@innodb_file_format;
+-------------------------+----------------------+
| @@innodb_file_per_table | @@innodb_file_format |
+-------------------------+----------------------+
|                       1 | Barracuda            |
+-------------------------+----------------------+

mysql > SELECT CONCAT('ALTER TABLE `', TABLE_NAME,'` ENGINE=InnoDB;') AS 'Copy & run these SQL statements:' FROM INFORMATION_SCHEMA.TABLES WHERE TABLE_SCHEMA="gitlabhq_production" AND TABLE_TYPE="BASE TABLE";

# If previous query returned results, copy & run all shown SQL statements

# You can now quit the database session
mysql> \q

Check for proper InnoDB File Format, Row Format, Large Prefix and tables conversion

We need to check, enable and probably convert your existing GitLab DB tables to use the Barracuda InnoDB file format, the DYNAMIC row format and innodb_large_prefix as a second prerequisite for supporting utfb8mb4 with long indexes used by recent GitLab databases.

# Login to MySQL
mysql -u root -p

# Type the MySQL root password
mysql > use gitlabhq_production;

# Set innodb_file_format and innodb_large_prefix on the running server:
# Note: These are the default settings only for MySQL 5.7.7 and later.

mysql > SET GLOBAL innodb_file_format=Barracuda, innodb_large_prefix=1;

# Your DB must be (still) using utf8/utf8_general_ci as default encoding and collation.
# We will NOT change the default encoding and collation on the DB in order to support future GitLab migrations creating tables
# that require "long indexes support" on installations using MySQL <= 5.7.9.
# However, when such migrations occur, you will have to follow this guide again to convert the newly created tables to the proper encoding/collation.

# This should return the following:
mysql> SELECT @@character_set_database, @@collation_database;
+--------------------------+----------------------+
| @@character_set_database | @@collation_database |
+--------------------------+----------------------+
| utf8                     | utf8_general_ci      |
+--------------------------+----------------------+

Now, ensure that innodb_file_format and innodb_large_prefix are persisted in your my.cnf file.

Tables and data conversion to utf8mb4

Now that you have a persistent MySQL setup, you can safely upgrade tables after setup or upgrade time:

# Convert tables not using ROW_FORMAT DYNAMIC:

mysql> SELECT CONCAT('ALTER TABLE `', TABLE_NAME,'` ROW_FORMAT=DYNAMIC;') AS 'Copy & run these SQL statements:' FROM INFORMATION_SCHEMA.TABLES WHERE TABLE_SCHEMA="gitlabhq_production" AND TABLE_TYPE="BASE TABLE" AND ROW_FORMAT!="Dynamic";

# !! If previous query returned results, copy & run all shown SQL statements

# Convert tables/columns not using utf8mb4/utf8mb4_general_ci as encoding/collation:

mysql > SET foreign_key_checks = 0;

mysql > SELECT CONCAT('ALTER TABLE `', TABLE_NAME,'` CONVERT TO CHARACTER SET utf8mb4 COLLATE utf8mb4_general_ci;') AS 'Copy & run these SQL statements:' FROM INFORMATION_SCHEMA.TABLES WHERE TABLE_SCHEMA="gitlabhq_production" AND TABLE_COLLATION != "utf8mb4_general_ci" AND TABLE_TYPE="BASE TABLE";

# !! If previous query returned results, copy & run all shown SQL statements

# Turn foreign key checks back on
mysql > SET foreign_key_checks = 1;

# You can now quit the database session
mysql> \q

Ensure your GitLab database configuration file uses a proper connection encoding and collation:

sudo -u git -H editor config/database.yml

production:
  adapter: mysql2
  encoding: utf8mb4
  collation: utf8mb4_general_ci

Restart your GitLab instance.

MySQL strings limits

After installation or upgrade, remember to run the add_limits_mysql Rake task:

Omnibus GitLab installations

sudo gitlab-rake add_limits_mysql

Installations from source

bundle exec rake add_limits_mysql RAILS_ENV=production

The text type in MySQL has a different size limit than the text type in PostgreSQL. In MySQL text columns are limited to ~65kB, whereas in PostgreSQL text columns are limited up to ~1GB!

The add_limits_mysql Rake task converts some important text columns in the GitLab database to longtext columns, which can persist values of up to 4GB (sometimes less if the value contains multibyte characters).

Details can be found in the PostgreSQL and MySQL manuals.