Sruthi Chandran 3bbd721fc3 New upstream version 14.0.10

2021-09-04 02:52:04 +05:30

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stage	group	info	type
Create	Gitaly	To determine the technical writer assigned to the Stage/Group associated with this page, see https://about.gitlab.com/handbook/engineering/ux/technical-writing/#assignments	reference

Gitaly and Gitaly Cluster (FREE SELF)

Gitaly provides high-level RPC access to Git repositories. It is used by GitLab to read and write Git data.

Gitaly implements a client-server architecture:

A Gitaly server is any node that runs Gitaly itself.
A Gitaly client is any node that runs a process that makes requests of the Gitaly server. These include, but are not limited to:

The following illustrates the Gitaly client-server architecture:

flowchart TD
  subgraph Gitaly clients
    A[GitLab Rails]
    B[GitLab Workhorse]
    C[GitLab Shell]
    D[...]
  end

  subgraph Gitaly
    E[Git integration]
  end

F[Local filesystem]

A -- gRPC --> Gitaly
B -- gRPC--> Gitaly
C -- gRPC --> Gitaly
D -- gRPC --> Gitaly

E --> F

End users do not have direct access to Gitaly. Gitaly manages only Git repository access for GitLab. Other types of GitLab data aren't accessed using Gitaly.

WARNING: From GitLab 14.0, enhancements and bug fixes for NFS for Git repositories will no longer be considered and customer technical support will be considered out of scope. Read more about Gitaly and NFS.

Configure Gitaly

Gitaly comes pre-configured with Omnibus GitLab, which is a configuration suitable for up to 1000 users. For:

Omnibus GitLab installations for up to 2000 users, see specific Gitaly configuration instructions.
Source installations or custom Gitaly installations, see Configure Gitaly.

GitLab installations for more than 2000 users should use Gitaly Cluster.

NOTE: If not set in GitLab, feature flags are read as false from the console and Gitaly uses their default value. The default value depends on the GitLab version.

Gitaly Cluster

Gitaly, the service that provides storage for Git repositories, can be run in a clustered configuration to scale the Gitaly service and increase fault tolerance. In this configuration, every Git repository is stored on every Gitaly node in the cluster.

Using a Gitaly Cluster increases fault tolerance by:

Replicating write operations to warm standby Gitaly nodes.
Detecting Gitaly node failures.
Automatically routing Git requests to an available Gitaly node.

NOTE: Technical support for Gitaly clusters is limited to GitLab Premium and Ultimate customers.

The availability objectives for Gitaly clusters are:

Recovery Point Objective (RPO): Less than 1 minute.

Writes are replicated asynchronously. Any writes that have not been replicated to the newly promoted primary are lost.

Strong consistency can be used to avoid loss in some circumstances.
Recovery Time Objective (RTO): Less than 10 seconds. Outages are detected by a health check run by each Praefect node every second. Failover requires ten consecutive failed health checks on each Praefect node.

Faster outage detection is planned to improve this to less than 1 second.

Gitaly Cluster supports:

Strong consistency of the secondary replicas.
Automatic failover from the primary to the secondary.
Reporting of possible data loss if replication queue is non-empty.
Marking repositories as read-only if data loss is detected to prevent data inconsistencies.

Follow the Gitaly Cluster epic for improvements including horizontally distributing reads.

Overview

Git storage is provided through the Gitaly service in GitLab, and is essential to the operation of the GitLab application. When the number of users, repositories, and activity grows, it is important to scale Gitaly appropriately by:

Increasing the available CPU and memory resources available to Git before resource exhaustion degrades Git, Gitaly, and GitLab application performance.
Increase available storage before storage limits are reached causing write operations to fail.
Improve fault tolerance by removing single points of failure. Git should be considered mission critical if a service degradation would prevent you from deploying changes to production.

Moving beyond NFS

WARNING: From GitLab 13.0, using NFS for Git repositories is deprecated. In GitLab 14.0, support for NFS for Git repositories is scheduled to be removed. Upgrade to Gitaly Cluster as soon as possible.

Network File System (NFS) is not well suited to Git workloads which are CPU and IOPS sensitive. Specifically:

Git is sensitive to file system latency. Even simple operations require many read operations. Operations that are fast on block storage can become an order of magnitude slower. This significantly impacts GitLab application performance.
NFS performance optimizations that prevent the performance gap between block storage and NFS being even wider are vulnerable to race conditions. We have observed data inconsistencies in production environments caused by simultaneous writes to different NFS clients. Data corruption is not an acceptable risk.

Gitaly Cluster is purpose built to provide reliable, high performance, fault tolerant Git storage.

Where Gitaly Cluster fits

GitLab accesses repositories through the configured repository storages. Each new repository is stored on one of the repository storages based on their configured weights. Each repository storage is either:

A Gitaly storage served directly by Gitaly. These map to a directory on the file system of a Gitaly node.
A virtual storage served by Praefect. A virtual storage is a cluster of Gitaly storages that appear as a single repository storage.

Virtual storages are a feature of Gitaly Cluster. They support replicating the repositories to multiple storages for fault tolerance. Virtual storages can improve performance by distributing requests across Gitaly nodes. Their distributed nature makes it viable to have a single repository storage in GitLab to simplify repository management.

Components of Gitaly Cluster

Gitaly Cluster consists of multiple components:

Load balancer for distributing requests and providing fault-tolerant access to Praefect nodes.
Praefect nodes for managing the cluster and routing requests to Gitaly nodes.
PostgreSQL database for persisting cluster metadata and PgBouncer, recommended for pooling Praefect's database connections.
Gitaly nodes to provide repository storage and Git access.

In this example:

Repositories are stored on a virtual storage called storage-1.
Three Gitaly nodes provide storage-1 access: gitaly-1, gitaly-2, and gitaly-3.
The three Gitaly nodes store data on their file systems.

Virtual storage or direct Gitaly storage

Gitaly supports multiple models of scaling:

Clustering using Gitaly Cluster, where each repository is stored on multiple Gitaly nodes in the cluster. Read requests are distributed between repository replicas and write requests are broadcast to repository replicas. GitLab accesses virtual storage.
Direct access to Gitaly storage using repository storage paths, where each repository is stored on the assigned Gitaly node. All requests are routed to this node.

The following is Gitaly set up to use direct access to Gitaly instead of Gitaly Cluster:

In this example:

Each repository is stored on one of three Gitaly storages: storage-1, storage-2, or storage-3.
Each storage is serviced by a Gitaly node.
The three Gitaly nodes share data in three separate hashed storage locations.
The replication factor is 3. There are three copies maintained of each repository.

Generally, virtual storage with Gitaly Cluster can replace direct Gitaly storage configurations, at the expense of additional storage needed to store each repository on multiple Gitaly nodes. The benefit of using Gitaly Cluster over direct Gitaly storage is:

Improved fault tolerance, because each Gitaly node has a copy of every repository.
Improved resource utilization, reducing the need for over-provisioning for shard-specific peak loads, because read loads are distributed across replicas.
Manual rebalancing for performance is not required, because read loads are distributed across replicas.
Simpler management, because all Gitaly nodes are identical.

Under some workloads, CPU and memory requirements may require a large fleet of Gitaly nodes. It can be uneconomical to have one to one replication factor.

A hybrid approach can be used in these instances, where each shard is configured as a smaller cluster. Variable replication factor is planned to provide greater flexibility for extremely large GitLab instances.

Architecture

Praefect is a router and transaction manager for Gitaly, and a required component for running a Gitaly Cluster.

For more information, see Gitaly High Availability (HA) Design.

Configure Gitaly Cluster

For more information on configuring Gitaly Cluster, see Configure Gitaly Cluster.

Do not bypass Gitaly

GitLab doesn't advise directly accessing Gitaly repositories stored on disk with a Git client, because Gitaly is being continuously improved and changed. These improvements may invalidate your assumptions, resulting in performance degradation, instability, and even data loss. For example:

Gitaly has optimizations such as the info/refs advertisement cache, that rely on Gitaly controlling and monitoring access to repositories by using the official gRPC interface.
Gitaly Cluster has optimizations, such as fault tolerance and distributed reads, that depend on the gRPC interface and database to determine repository state.

WARNING: Accessing Git repositories directly is done at your own risk and is not supported.

Direct access to Git in GitLab

Direct access to Git uses code in GitLab known as the "Rugged patches".

Before Gitaly existed, what are now Gitaly clients accessed Git repositories directly, either:

On a local disk in the case of a single-machine Omnibus GitLab installation.
Using NFS in the case of a horizontally-scaled GitLab installation.

In addition to running plain git commands, GitLab used a Ruby library called Rugged. Rugged is a wrapper around libgit2, a stand-alone implementation of Git in the form of a C library.

Over time it became clear that Rugged, particularly in combination with Unicorn, is extremely efficient. Because libgit2 is a library and not an external process, there was very little overhead between:

GitLab application code that tried to look up data in Git repositories.
The Git implementation itself.

Because the combination of Rugged and Unicorn was so efficient, the GitLab application code ended up with lots of duplicate Git object lookups. For example, looking up the default branch commit a dozen times in one request. We could write inefficient code without poor performance.

When we migrated these Git lookups to Gitaly calls, we suddenly had a much higher fixed cost per Git lookup. Even when Gitaly is able to re-use an already-running git process (for example, to look up a commit), you still have:

The cost of a network roundtrip to Gitaly.
Inside Gitaly, a write/read roundtrip on the Unix pipes that connect Gitaly to the git process.

Using GitLab.com to measure, we reduced the number of Gitaly calls per request until the loss of Rugged's efficiency was no longer felt. It also helped that we run Gitaly itself directly on the Git file servers, rather than by using NFS mounts. This gave us a speed boost that counteracted the negative effect of not using Rugged anymore.

Unfortunately, other deployments of GitLab could not remove NFS like we did on GitLab.com, and they got the worst of both worlds:

The slowness of NFS.
The increased inherent overhead of Gitaly.

The code removed from GitLab during the Gitaly migration project affected these deployments. As a performance workaround for these NFS-based deployments, we re-introduced some of the old Rugged code. This re-introduced code is informally referred to as the "Rugged patches".

How it works

The Ruby methods that perform direct Git access are behind feature flags, disabled by default. It wasn't convenient to set feature flags to get the best performance, so we added an automatic mechanism that enables direct Git access.

When GitLab calls a function that has a "Rugged patch", it performs two checks:

Is the feature flag for this patch set in the database? If so, the feature flag setting controls the GitLab use of "Rugged patch" code.
If the feature flag is not set, GitLab tries accessing the file system underneath the Gitaly server directly. If it can, it uses the "Rugged patch":
- If using Puma and thread count is set to 1.

The result of these checks is cached.

To see if GitLab can access the repository file system directly, we use the following heuristic:

Gitaly ensures that the file system has a metadata file in its root with a UUID in it.
Gitaly reports this UUID to GitLab by using the ServerInfo RPC.
GitLab Rails tries to read the metadata file directly. If it exists, and if the UUID's match, assume we have direct access.

Direct Git access is enable by default in Omnibus GitLab because it fills in the correct repository paths in the GitLab configuration file config/gitlab.yml. This satisfies the UUID check.

WARNING: If directly copying repository data from a GitLab server to Gitaly, ensure that the metadata file, default path /var/opt/gitlab/git-data/repositories/.gitaly-metadata, is not included in the transfer. Copying this file causes GitLab to use the Rugged patches for repositories hosted on the Gitaly server, leading to Error creating pipeline and Commit not found errors, or stale data.

Transition to Gitaly Cluster

For the sake of removing complexity, we must remove direct Git access in GitLab. However, we can't remove it as long some GitLab installations require Git repositories on NFS.

There are two facets to our efforts to remove direct Git access in GitLab:

Reduce the number of inefficient Gitaly queries made by GitLab.
Persuade administrators of fault-tolerant or horizontally-scaled GitLab instances to migrate off NFS.

The second facet presents the only real solution. For this, we developed Gitaly Cluster.

NFS deprecation notice

From GitLab 14.0, enhancements and bug fixes for NFS for Git repositories will no longer be considered and customer technical support will be considered out of scope.

Additional information:

GitLab recommends:

Creating a Gitaly Cluster as soon as possible.
Moving your repositories from NFS-based storage to Gitaly Cluster.

We welcome your feedback on this process: raise a support ticket, or comment on the epic.

Troubleshooting

Refer to the information below when troubleshooting Gitaly and Gitaly Cluster.

Before troubleshooting, see the Gitaly and Gitaly Cluster frequently asked questions.

Troubleshoot Gitaly

The following sections provide possible solutions to Gitaly errors.

Check versions when using standalone Gitaly servers

When using standalone Gitaly servers, you must make sure they are the same version as GitLab to ensure full compatibility:

On the top bar, select Menu > {admin} Admin on your GitLab instance.
On the left sidebar, select Overview > Gitaly Servers.
Confirm all Gitaly servers indicate that they are up to date.

Use `gitaly-debug`

The gitaly-debug command provides "production debugging" tools for Gitaly and Git performance. It is intended to help production engineers and support engineers investigate Gitaly performance problems.

If you're using GitLab 11.6 or newer, this tool should be installed on your GitLab or Gitaly server already at /opt/gitlab/embedded/bin/gitaly-debug. If you're investigating an older GitLab version you can compile this tool offline and copy the executable to your server:

git clone https://gitlab.com/gitlab-org/gitaly.git
cd cmd/gitaly-debug
GOOS=linux GOARCH=amd64 go build -o gitaly-debug

To see the help page of gitaly-debug for a list of supported sub-commands, run:

gitaly-debug -h

Commits, pushes, and clones return a 401

remote: GitLab: 401 Unauthorized

You need to sync your gitlab-secrets.json file with your GitLab application nodes.

Client side gRPC logs

Gitaly uses the gRPC RPC framework. The Ruby gRPC client has its own log file which may contain useful information when you are seeing Gitaly errors. You can control the log level of the gRPC client with the GRPC_LOG_LEVEL environment variable. The default level is WARN.

You can run a gRPC trace with:

sudo GRPC_TRACE=all GRPC_VERBOSITY=DEBUG gitlab-rake gitlab:gitaly:check

Server side gRPC logs

gRPC tracing can also be enabled in Gitaly itself with the GODEBUG=http2debug environment variable. To set this in an Omnibus GitLab install:

Add the following to your gitlab.rb file:

gitaly['env'] = {
  "GODEBUG=http2debug" => "2"
}

Reconfigure GitLab.

Correlating Git processes with RPCs

Sometimes you need to find out which Gitaly RPC created a particular Git process.

One method for doing this is by using DEBUG logging. However, this needs to be enabled ahead of time and the logs produced are quite verbose.

A lightweight method for doing this correlation is by inspecting the environment of the Git process (using its PID) and looking at the CORRELATION_ID variable:

PID=<Git process ID>
sudo cat /proc/$PID/environ | tr '\0' '\n' | grep ^CORRELATION_ID=

This method isn't reliable for git cat-file processes, because Gitaly internally pools and re-uses those across RPCs.

Observing `gitaly-ruby` traffic

gitaly-ruby is an internal implementation detail of Gitaly, so, there's not that much visibility into what goes on inside gitaly-ruby processes.

If you have Prometheus set up to scrape your Gitaly process, you can see request rates and error codes for individual RPCs in gitaly-ruby by querying grpc_client_handled_total.

In theory, this metric does not differentiate between gitaly-ruby and other RPCs.
In practice from GitLab 11.9, all gRPC calls made by Gitaly itself are internal calls from the main Gitaly process to one of its gitaly-ruby sidecars.

Assuming your grpc_client_handled_total counter only observes Gitaly, the following query shows you RPCs are (most likely) internally implemented as calls to gitaly-ruby:

sum(rate(grpc_client_handled_total[5m])) by (grpc_method) > 0

Repository changes fail with a `401 Unauthorized` error

If you run Gitaly on its own server and notice these conditions:

Users can successfully clone and fetch repositories by using both SSH and HTTPS.
Users can't push to repositories, or receive a 401 Unauthorized message when attempting to make changes to them in the web UI.

Gitaly may be failing to authenticate with the Gitaly client because it has the wrong secrets file.

Confirm the following are all true:

When any user performs a git push to any repository on this Gitaly server, it fails with a 401 Unauthorized error:

remote: GitLab: 401 Unauthorized
To <REMOTE_URL>
! [remote rejected] branch-name -> branch-name (pre-receive hook declined)
error: failed to push some refs to '<REMOTE_URL>'

When any user adds or modifies a file from the repository using the GitLab UI, it immediately fails with a red 401 Unauthorized banner.
Creating a new project and initializing it with a README successfully creates the project but doesn't create the README.

When tailing the logs on a Gitaly client and reproducing the error, you get 401 errors when reaching the /api/v4/internal/allowed endpoint:

# api_json.log
{
  "time": "2019-07-18T00:30:14.967Z",
  "severity": "INFO",
  "duration": 0.57,
  "db": 0,
  "view": 0.57,
  "status": 401,
  "method": "POST",
  "path": "\/api\/v4\/internal\/allowed",
  "params": [
    {
      "key": "action",
      "value": "git-receive-pack"
    },
    {
      "key": "changes",
      "value": "REDACTED"
    },
    {
      "key": "gl_repository",
      "value": "REDACTED"
    },
    {
      "key": "project",
      "value": "\/path\/to\/project.git"
    },
    {
      "key": "protocol",
      "value": "web"
    },
    {
      "key": "env",
      "value": "{\"GIT_ALTERNATE_OBJECT_DIRECTORIES\":[],\"GIT_ALTERNATE_OBJECT_DIRECTORIES_RELATIVE\":[],\"GIT_OBJECT_DIRECTORY\":null,\"GIT_OBJECT_DIRECTORY_RELATIVE\":null}"
    },
    {
      "key": "user_id",
      "value": "2"
    },
    {
      "key": "secret_token",
      "value": "[FILTERED]"
    }
  ],
  "host": "gitlab.example.com",
  "ip": "REDACTED",
  "ua": "Ruby",
  "route": "\/api\/:version\/internal\/allowed",
  "queue_duration": 4.24,
  "gitaly_calls": 0,
  "gitaly_duration": 0,
  "correlation_id": "XPUZqTukaP3"
}

# nginx_access.log
[IP] - - [18/Jul/2019:00:30:14 +0000] "POST /api/v4/internal/allowed HTTP/1.1" 401 30 "" "Ruby"

To fix this problem, confirm that your gitlab-secrets.json file on the Gitaly server matches the one on Gitaly client. If it doesn't match, update the secrets file on the Gitaly server to match the Gitaly client, then reconfigure.

Command line tools cannot connect to Gitaly

gRPC cannot reach your Gitaly server if:

You can't connect to a Gitaly server with command-line tools.
Certain actions result in a 14: Connect Failed error message.

Verify you can reach Gitaly by using TCP:

sudo gitlab-rake gitlab:tcp_check[GITALY_SERVER_IP,GITALY_LISTEN_PORT]

If the TCP connection:

Fails, check your network settings and your firewall rules.
Succeeds, your networking and firewall rules are correct.

If you use proxy servers in your command line environment such as Bash, these can interfere with your gRPC traffic.

If you use Bash or a compatible command line environment, run the following commands to determine whether you have proxy servers configured:

echo $http_proxy
echo $https_proxy

If either of these variables have a value, your Gitaly CLI connections may be getting routed through a proxy which cannot connect to Gitaly.

To remove the proxy setting, run the following commands (depending on which variables had values):

unset http_proxy
unset https_proxy

Permission denied errors appearing in Gitaly or Praefect logs when accessing repositories

You might see the following in Gitaly and Praefect logs:

{
  ...
  "error":"rpc error: code = PermissionDenied desc = permission denied",
  "grpc.code":"PermissionDenied",
  "grpc.meta.client_name":"gitlab-web",
  "grpc.request.fullMethod":"/gitaly.ServerService/ServerInfo",
  "level":"warning",
  "msg":"finished unary call with code PermissionDenied",
  ...
}

This is a GRPC call error response code.

If this error occurs, even though the Gitaly auth tokens are set up correctly, it's likely that the Gitaly servers are experiencing clock drift.

Ensure the Gitaly clients and servers are synchronized, and use an NTP time server to keep them synchronized.

Gitaly not listening on new address after reconfiguring

When updating the gitaly['listen_addr'] or gitaly['prometheus_listen_addr'] values, Gitaly may continue to listen on the old address after a sudo gitlab-ctl reconfigure.

When this occurs, run sudo gitlab-ctl restart to resolve the issue. This should no longer be necessary because this issue is resolved.

Permission denied errors appearing in Gitaly logs when accessing repositories from a standalone Gitaly node

If this error occurs even though file permissions are correct, it's likely that the Gitaly node is experiencing clock drift.

Please ensure that the GitLab and Gitaly nodes are synchronized and use an NTP time server to keep them synchronized if possible.

Troubleshoot Praefect (Gitaly Cluster)

The following sections provide possible solutions to Gitaly Cluster errors.

Praefect errors in logs

If you receive an error, check /var/log/gitlab/gitlab-rails/production.log.

Here are common errors and potential causes:

500 response code
- ActionView::Template::Error (7:permission denied)
  - praefect['auth_token'] and gitlab_rails['gitaly_token'] do not match on the GitLab server.
- Unable to save project. Error: 7:permission denied
  - Secret token in praefect['storage_nodes'] on GitLab server does not match the value in gitaly['auth_token'] on one or more Gitaly servers.
503 response code
- GRPC::Unavailable (14:failed to connect to all addresses)
  - GitLab was unable to reach Praefect.
- GRPC::Unavailable (14:all SubCons are in TransientFailure...)
  - Praefect cannot reach one or more of its child Gitaly nodes. Try running the Praefect connection checker to diagnose.

Determine primary Gitaly node

To determine the current primary Gitaly node for a specific Praefect node:

Use the Shard Primary Election Grafana chart on the Gitlab Omnibus - Praefect dashboard. This is recommended.
If you do not have Grafana set up, use the following command on each host of each Praefect node:
```
curl localhost:9652/metrics | grep gitaly_praefect_primaries`
```

Relation does not exist errors

By default Praefect database tables are created automatically by gitlab-ctl reconfigure task. However, if the gitlab-ctl reconfigure command isn't executed or there are errors during the execution, the Praefect database tables are not created on initial reconfigure and can throw errors that relations do not exist.

For example:

ERROR: relation "node_status" does not exist at character 13
ERROR: relation "replication_queue_lock" does not exist at character 40

This error:

{"level":"error","msg":"Error updating node: pq: relation \"node_status\" does not exist","pid":210882,"praefectName":"gitlab1x4m:0.0.0.0:2305","time":"2021-04-01T19:26:19.473Z","virtual_storage":"praefect-cluster-1"}

To solve this, the database schema migration can be done using sql-migrate sub-command of the praefect command:

$ sudo /opt/gitlab/embedded/bin/praefect -config /var/opt/gitlab/praefect/config.toml sql-migrate
praefect sql-migrate: OK (applied 21 migrations)

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