644 lines
26 KiB
Markdown
644 lines
26 KiB
Markdown
---
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stage: Enablement
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group: Sharding
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info: To determine the technical writer assigned to the Stage/Group associated with this page, see https://about.gitlab.com/handbook/engineering/ux/technical-writing/#assignments
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---
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# Multiple Databases
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To scale GitLab, the we are
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[decomposing the GitLab application database into multiple databases](https://gitlab.com/groups/gitlab-org/-/epics/6168).
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## GitLab Schema
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For properly discovering allowed patterns between different databases
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the GitLab application implements the `lib/gitlab/database/gitlab_schemas.yml` YAML file.
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This file provides a virtual classification of tables into a `gitlab_schema`
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which conceptually is similar to [PostgreSQL Schema](https://www.postgresql.org/docs/current/ddl-schemas.html).
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We decided as part of [using database schemas to better isolated CI decomposed features](https://gitlab.com/gitlab-org/gitlab/-/issues/333415)
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that we cannot use PostgreSQL schema due to complex migration procedures. Instead we implemented
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the concept of application-level classification.
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Each table of GitLab needs to have a `gitlab_schema` assigned:
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- `gitlab_main`: describes all tables that are being stored in the `main:` database (for example, like `projects`, `users`).
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- `gitlab_ci`: describes all CI tables that are being stored in the `ci:` database (for example, `ci_pipelines`, `ci_builds`).
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- `gitlab_shared`: describe all application tables that contain data across all decomposed databases (for example, `loose_foreign_keys_deleted_records`).
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- `...`: more schemas to be introduced with additional decomposed databases
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The usage of schema enforces the base class to be used:
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- `ApplicationRecord` for `gitlab_main`
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- `Ci::ApplicationRecord` for `gitlab_ci`
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- `Gitlab::Database::SharedModel` for `gitlab_shared`
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### The impact of `gitlab_schema`
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The usage of `gitlab_schema` has a significant impact on the application.
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The `gitlab_schema` primary purpose is to introduce a barrier between different data access patterns.
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This is used as a primary source of classification for:
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- [Discovering cross-joins across tables from different schemas](#removing-joins-between-ci_-and-non-ci_-tables)
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- [Discovering cross-database transactions across tables from different schemas](#removing-cross-database-transactions)
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### The special purpose of `gitlab_shared`
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`gitlab_shared` is a special case describing tables or views that by design contain data across
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all decomposed databases. This does describe application-defined tables (like `loose_foreign_keys_deleted_records`),
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Rails-defined tables (like `schema_migrations` or `ar_internal_metadata` as well as internal PostgreSQL tables
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(for example, `pg_attribute`).
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**Be careful** to use `gitlab_shared` as it requires special handling while accessing data.
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Since `gitlab_shared` shares not only structure but also data, the application needs to be written in a way
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that traverses all data from all databases in sequential manner.
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```ruby
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Gitlab::Database::EachDatabase.each_model_connection([MySharedModel]) do |connection, connection_name|
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MySharedModel.select_all_data...
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end
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```
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As such, migrations modifying data of `gitlab_shared` tables are expected to run across
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all decomposed databases.
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## Migrations
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Read [Migrations for Multiple Databases](migrations_for_multiple_databases.md).
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## CI/CD Database
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> Support for configuring the GitLab Rails application to use a distinct
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database for CI/CD tables was [introduced](https://gitlab.com/gitlab-org/gitlab/-/merge_requests/64289)
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in GitLab 14.1. This feature is still under development, and is not ready for production use.
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### Configure single database
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By default, GDK is configured to run with multiple databases. To configure GDK to use a single database:
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1. On the GDK root directory, run:
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```shell
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gdk config set gitlab.rails.databases.ci.enabled false
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```
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1. Reconfigure GDK:
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```shell
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gdk reconfigure
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```
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To switch back to using multiple databases, set `gitlab.rails.databases.ci.enabled` to `true` and run `gdk reconfigure`.
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<!--
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NOTE: The `validate_cross_joins!` method in `spec/support/database/prevent_cross_joins.rb` references
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the following heading in the code, so if you make a change to this heading, make sure to update
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the corresponding documentation URL used in `spec/support/database/prevent_cross_joins.rb`.
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-->
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### Removing joins between `ci_*` and non `ci_*` tables
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Queries that join across databases raise an error. [Introduced](https://gitlab.com/gitlab-org/gitlab/-/merge_requests/68620)
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in GitLab 14.3, for new queries only. Pre-existing queries do not raise an error.
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We are planning on moving all the `ci_*` tables to a separate database, so
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referencing `ci_*` tables with other tables will not be possible. This means,
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that using any kind of `JOIN` in SQL queries will not work. We have identified
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already many such examples that need to be fixed in
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<https://gitlab.com/groups/gitlab-org/-/epics/6289> .
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#### Path to removing cross-database joins
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The following steps are the process to remove cross-database joins between
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`ci_*` and non `ci_*` tables:
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1. **{check-circle}** Add all failing specs to the [`cross-join-allowlist.yml`](https://gitlab.com/gitlab-org/gitlab/-/blob/master/spec/support/database/cross-join-allowlist.yml)
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file.
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1. **{check-circle}** Find the code that caused the spec failure and wrap the isolated code
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in [`allow_cross_joins_across_databases`](#allowlist-for-existing-cross-joins).
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Link to a new issue assigned to the correct team to remove the specs from the
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`cross-join-allowlist.yml` file.
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1. **{dotted-circle}** Remove the `cross-join-allowlist.yml` file and stop allowing
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whole test files.
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1. **{dotted-circle}** Fix the problem and remove the `allow_cross_joins_across_databases` call.
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1. **{dotted-circle}** Fix all the cross-joins and remove the `allow_cross_joins_across_databases` method.
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#### Suggestions for removing cross-database joins
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The following sections are some real examples that were identified as joining across databases,
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along with possible suggestions on how to fix them.
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##### Remove the code
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The simplest solution we've seen several times now has been an existing scope
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that is unused. This is the easiest example to fix. So the first step is to
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investigate if the code is unused and then remove it. These are some
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real examples:
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- <https://gitlab.com/gitlab-org/gitlab/-/merge_requests/67162>
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- <https://gitlab.com/gitlab-org/gitlab/-/merge_requests/66714>
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- <https://gitlab.com/gitlab-org/gitlab/-/merge_requests/66503>
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There may be more examples where the code is used, but we can evaluate
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if we need it or if the feature should behave this way.
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Before complicating things by adding new columns and tables,
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consider if you can simplify the solution and still meet the requirements.
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One case being evaluated involves changing how certain `UsageData` is
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calculated to remove a join query in
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<https://gitlab.com/gitlab-org/gitlab/-/issues/336170>. This is a good candidate
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to evaluate, because `UsageData` is not critical to users and it may be possible
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to get a similarly useful metric with a simpler approach. Alternatively we may
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find that nobody is using these metrics, so we can remove them.
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##### Use `preload` instead of `includes`
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The `includes` and `preload` methods in Rails are both ways to avoid an N+1
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query. The `includes` method in Rails uses a heuristic approach to determine
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if it needs to join to the table, or if it can load all of the
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records in a separate query. This method assumes it needs to join if it thinks
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you need to query the columns from the other table, but sometimes
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this method gets it wrong and executes a join even when not needed. In
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this case using `preload` to explicitly load the data in a separate query
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allows you to avoid the join, while still avoiding the N+1 query.
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You can see a real example of this solution being used in
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<https://gitlab.com/gitlab-org/gitlab/-/merge_requests/67655>.
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##### De-normalize some foreign key to the table
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De-normalization refers to adding redundant precomputed (duplicated) data to
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a table to simplify certain queries or to improve performance. In this
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case, it can be useful when you are doing a join that involves three tables, where
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you are joining through some intermediate table.
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Generally when modeling a database schema, a "normalized" structure is
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preferred because of the following reasons:
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- Duplicate data uses extra storage.
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- Duplicate data needs to be kept in sync.
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Sometimes normalized data is less performant so de-normalization has been a
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common technique GitLab has used to improve the performance of database queries
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for a while. The above problems are mitigated when the following conditions are
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met:
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1. There isn't much data (for example, it's just an integer column).
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1. The data does not update often (for example, the `project_id` column is almost
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never updated for most tables).
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One example we found was the `security_scans` table. This table has a foreign
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key `security_scans.build_id` which allows you to join to the build. Therefore
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you could join to the project like so:
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```sql
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select projects.* from security_scans
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inner join ci_builds on security_scans.build_id = ci_builds.id
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inner join projects on ci_builds.project_id = projects.id
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```
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The problem with this query is that `ci_builds` is in a different database
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from the other two tables.
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The solution in this case is to add the `project_id` column to
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`security_scans`. This doesn't use much extra storage, and due to the way
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these features work, it's never updated (a build never moves projects).
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This simplified the query to:
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```sql
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select projects.* from security_scans
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inner join projects on security_scans.project_id = projects.id
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```
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This also improves performance because you don't need to join through an extra
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table.
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You can see this approach implemented in
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<https://gitlab.com/gitlab-org/gitlab/-/merge_requests/66963> . This MR also
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de-normalizes `pipeline_id` to fix a similar query.
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##### De-normalize into an extra table
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Sometimes the previous de-normalization (adding an extra column) doesn't work for
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your specific case. This may be due to the fact that your data is not 1:1, or
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because the table you're adding to is already too wide (for example, the `projects`
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table shouldn't have more columns added).
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In this case you may decide to just store the extra data in a separate table.
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One example where this approach is being used was to implement the
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`Project.with_code_coverage` scope. This scope was essentially used to narrow
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down a list of projects to only those that have at one point in time used code
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coverage features. This query (simplified) was:
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```sql
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select projects.* from projects
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inner join ci_daily_build_group_report_results on ci_daily_build_group_report_results.project_id = projects.id
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where ((data->'coverage') is not null)
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and ci_daily_build_group_report_results.default_branch = true
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group by projects.id
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```
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This work is still in progress but the current plan is to introduce a new table
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called `projects_with_ci_feature_usage` which has 2 columns `project_id` and
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`ci_feature`. This table would be written to the first time a project creates a
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`ci_daily_build_group_report_results` for code coverage. Therefore the new
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query would be:
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```sql
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select projects.* from projects
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inner join projects_with_ci_feature_usage on projects_with_ci_feature_usage.project_id = projects.id
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where projects_with_ci_feature_usage.ci_feature = 'code_coverage'
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```
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The above example uses as a text column for simplicity but we should probably
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use an [enum](../creating_enums.md) to save space.
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The downside of this new design is that this may need to be
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updated (removed if the `ci_daily_build_group_report_results` is deleted).
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Depending on your domain, however, this may not be necessary because deletes are
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edge cases or impossible, or because the user impact of seeing the project on the
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list page may not be problematic. It's also possible to implement the
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logic to delete these rows if or whenever necessary in your domain.
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Finally, this de-normalization and new query also improves performance because
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it does less joins and needs less filtering.
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##### Remove a redundant join
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Sometimes there are cases where a query is doing excess (or redundant) joins.
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A common example occurs where a query is joining from `A` to `C`, via some
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table with both foreign keys, `B`.
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When you only care about counting how
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many rows there are in `C` and if there are foreign keys and `NOT NULL` constraints
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on the foreign keys in `B`, then it might be enough to count those rows.
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For example, in
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[MR 71811](https://gitlab.com/gitlab-org/gitlab/-/merge_requests/71811), it was
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previously doing `project.runners.count`, which would produce a query like:
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```sql
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select count(*) from projects
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inner join ci_runner_projects on ci_runner_projects.project_id = projects.id
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where ci_runner_projects.runner_id IN (1, 2, 3)
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```
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This was changed to avoid the cross-join by changing the code to
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`project.runner_projects.count`. It produces the same response with the
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following query:
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```sql
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select count(*) from ci_runner_projects
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where ci_runner_projects.runner_id IN (1, 2, 3)
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```
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Another common redundant join is joining all the way to another table,
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then filtering by primary key when you could have instead filtered on a foreign
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key. See an example in
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[MR 71614](https://gitlab.com/gitlab-org/gitlab/-/merge_requests/71614). The previous
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code was `joins(scan: :build).where(ci_builds: { id: build_ids })`, which
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generated a query like:
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```sql
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select ...
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inner join security_scans
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inner join ci_builds on security_scans.build_id = ci_builds.id
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where ci_builds.id IN (1, 2, 3)
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```
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However, as `security_scans` already has a foreign key `build_id`, the code
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can be changed to `joins(:scan).where(security_scans: { build_id: build_ids })`,
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which produces the same response with the following query:
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```sql
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select ...
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inner join security_scans
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where security_scans.build_id IN (1, 2, 3)
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```
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Both of these examples of removing redundant joins remove the cross-joins,
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but they have the added benefit of producing simpler and faster
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queries.
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##### Use `disable_joins` for `has_one` or `has_many` `through:` relations
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Sometimes a join query is caused by using `has_one ... through:` or `has_many
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... through:` across tables that span the different databases. These joins
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sometimes can be solved by adding
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[`disable_joins:true`](https://edgeguides.rubyonrails.org/active_record_multiple_databases.html#handling-associations-with-joins-across-databases).
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This is a Rails feature which we
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[backported](https://gitlab.com/gitlab-org/gitlab/-/merge_requests/66400). We
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also extended the feature to allow a lambda syntax for enabling `disable_joins`
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with a feature flag. If you use this feature we encourage using a feature flag
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as it mitigates risk if there is some serious performance regression.
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You can see an example where this was used in
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<https://gitlab.com/gitlab-org/gitlab/-/merge_requests/66709/diffs>.
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With any change to DB queries it is important to analyze and compare the SQL
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before and after the change. `disable_joins` can introduce very poorly performing
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code depending on the actual logic of the `has_many` or `has_one` relationship.
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The key thing to look for is whether any of the intermediate result sets
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used to construct the final result set have an unbounded amount of data loaded.
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The best way to tell is by looking at the SQL generated and confirming that
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each one is limited in some way. You can tell by either a `LIMIT 1` clause or
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by `WHERE` clause that is limiting based on a unique column. Any unbounded
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intermediate dataset could lead to loading too many IDs into memory.
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An example where you may see very poor performance is the following
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hypothetical code:
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```ruby
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class Project
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has_many :pipelines
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has_many :builds, through: :pipelines
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end
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class Pipeline
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has_many :builds
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end
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class Build
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belongs_to :pipeline
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end
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def some_action
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@builds = Project.find(5).builds.order(created_at: :desc).limit(10)
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end
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```
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In the above case `some_action` will generate a query like:
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```sql
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select * from builds
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inner join pipelines on builds.pipeline_id = pipelines.id
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where pipelines.project_id = 5
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order by builds.created_at desc
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limit 10
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```
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However, if you changed the relation to be:
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```ruby
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class Project
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has_many :pipelines
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has_many :builds, through: :pipelines, disable_joins: true
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end
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```
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Then you would get the following 2 queries:
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```sql
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select id from pipelines where project_id = 5;
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select * from builds where pipeline_id in (...)
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order by created_at desc
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limit 10;
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```
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Because the first query does not limit by any unique column or
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have a `LIMIT` clause, it can load an unlimited number of
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pipeline IDs into memory, which are then sent in the following query.
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This can lead to very poor performance in the Rails application and the
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database. In cases like this, you might need to re-write the
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query or look at other patterns described above for removing cross-joins.
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#### How to validate you have correctly removed a cross-join
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Using RSpec tests, you can validate all SQL queries within a code block to
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ensure that none of them are joining across the two databases. This is a useful
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tool to confirm you have correctly fixed an existing cross-join.
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At some point in the future we will have fixed all cross-joins and this tool
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will run by default in all tests. For now, the tool needs to be explicitly enabled
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for your test.
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You can use this method like so:
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```ruby
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it 'does not join across databases' do
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with_cross_joins_prevented do
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::Ci::Build.joins(:project).to_a
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end
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end
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```
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This will raise an exception if the query joins across the two databases. The
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previous example is fixed by removing the join, like so:
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```ruby
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it 'does not join across databases' do
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with_cross_joins_prevented do
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::Ci::Build.preload(:project).to_a
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end
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end
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```
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You can see a real example of using this method for fixing a cross-join in
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<https://gitlab.com/gitlab-org/gitlab/-/merge_requests/67655>.
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#### Allowlist for existing cross-joins
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A cross-join across databases can be explicitly allowed by wrapping the code in the
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`::Gitlab::Database.allow_cross_joins_across_databases` helper method. Alternative
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way is to mark a given relation as `relation.allow_cross_joins_across_databases`.
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This method should only be used:
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- For existing code.
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- If the code is required to help migrate away from a cross-join. For example,
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in a migration that backfills data for future use to remove a cross-join.
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The `allow_cross_joins_across_databases` helper method can be used as follows:
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```ruby
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# Scope the block executing a object from database
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::Gitlab::Database.allow_cross_joins_across_databases(url: 'https://gitlab.com/gitlab-org/gitlab/-/issues/336590') do
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subject.perform(1, 4)
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end
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```
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```ruby
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# Mark a relation as allowed to cross-join databases
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def find_actual_head_pipeline
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all_pipelines
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.allow_cross_joins_across_databases(url: 'https://gitlab.com/gitlab-org/gitlab/-/issues/336891')
|
|
.for_sha_or_source_sha(diff_head_sha)
|
|
.first
|
|
end
|
|
```
|
|
|
|
The `url` parameter should point to an issue with a milestone for when we intend
|
|
to fix the cross-join. If the cross-join is being used in a migration, we do not
|
|
need to fix the code. See <https://gitlab.com/gitlab-org/gitlab/-/issues/340017>
|
|
for more details.
|
|
|
|
### Removing cross-database transactions
|
|
|
|
When dealing with multiple databases, it's important to pay close attention to data modification
|
|
that affects more than one database.
|
|
[Introduced](https://gitlab.com/gitlab-org/gitlab/-/issues/339811) GitLab 14.4, an automated check
|
|
prevents cross-database modifications.
|
|
|
|
When at least two different databases are modified during a transaction initiated on any database
|
|
server, the application triggers a cross-database modification error (only in test environment).
|
|
|
|
Example:
|
|
|
|
```ruby
|
|
# Open transaction on Main DB
|
|
ApplicationRecord.transaction do
|
|
ci_build.update!(updated_at: Time.current) # UPDATE on CI DB
|
|
ci_build.project.update!(updated_at: Time.current) # UPDATE on Main DB
|
|
end
|
|
# raises error: Cross-database data modification of 'main, ci' were detected within
|
|
# a transaction modifying the 'ci_build, projects' tables
|
|
```
|
|
|
|
The code example above updates the timestamp for two records within a transaction. With the
|
|
ongoing work on the CI database decomposition, we cannot ensure the schematics of a database
|
|
transaction.
|
|
If the second update query fails, the first update query will not be
|
|
rolled back because the `ci_build` record is located on a different database server. For
|
|
more information, look at the
|
|
[transaction guidelines](transaction_guidelines.md#dangerous-example-third-party-api-calls)
|
|
page.
|
|
|
|
#### Fixing cross-database errors
|
|
|
|
##### Removing the transaction block
|
|
|
|
Without an open transaction, the cross-database modification check cannot raise an error.
|
|
By making this change, we sacrifice consistency. In case of an application failure after the
|
|
first `UPDATE` query, the second `UPDATE` query will never execute.
|
|
|
|
The same code without the `transaction` block:
|
|
|
|
```ruby
|
|
ci_build.update!(updated_at: Time.current) # CI DB
|
|
ci_build.project.update!(updated_at: Time.current) # Main DB
|
|
```
|
|
|
|
##### Async processing
|
|
|
|
If we need more guarantee that an operation finishes the work consistently we can execute it
|
|
within a background job. A background job is scheduled asynchronously and retried several times
|
|
in case of an error. There is still a very small chance of introducing inconsistency.
|
|
|
|
Example:
|
|
|
|
```ruby
|
|
current_time = Time.current
|
|
|
|
MyAsyncConsistencyJob.perform_async(cu_build.id)
|
|
|
|
ci_build.update!(updated_at: current_time)
|
|
ci_build.project.update!(updated_at: current_time)
|
|
```
|
|
|
|
The `MyAsyncConsistencyJob` would also attempt to update the timestamp if they differ.
|
|
|
|
##### Aiming for perfect consistency
|
|
|
|
At this point, we don't have the tooling (we might not even need it) to ensure similar consistency
|
|
characteristics as we had with one database. If you think that the code you're working on requires
|
|
these properties, then you can disable the cross-database modification check by wrapping to
|
|
offending database queries with a block and create a follow-up issue mentioning the sharding group
|
|
(`gitlab-org/sharding-group`).
|
|
|
|
```ruby
|
|
Gitlab::Database.allow_cross_joins_across_databases(url: 'gitlab issue URL') do
|
|
ApplicationRecord.transaction do
|
|
ci_build.update!(updated_at: Time.current) # UPDATE on CI DB
|
|
ci_build.project.update!(updated_at: Time.current) # UPDATE on Main DB
|
|
end
|
|
end
|
|
```
|
|
|
|
Don't hesitate to reach out to the
|
|
[sharding group](https://about.gitlab.com/handbook/engineering/development/enablement/sharding/)
|
|
for advice.
|
|
|
|
##### Avoid `dependent: :nullify` and `dependent: :destroy` across databases
|
|
|
|
There may be cases where we want to use `dependent: :nullify` or `dependent: :destroy`
|
|
across databases. This is technically possible, but it's problematic because
|
|
these hooks run in the context of an outer transaction from the call to
|
|
`#destroy`, which creates a cross-database transaction and we are trying to
|
|
avoid that. Cross-database transactions caused this way could lead to confusing
|
|
outcomes when we switch to decomposed, because now you have some queries
|
|
happening outside the transaction and they may be partially applied while the
|
|
outer transaction fails, which could lead to surprising bugs.
|
|
|
|
For non-trivial objects that need to clean up data outside the
|
|
database (for example, object storage), we recommend the setting
|
|
[`dependent: :restrict_with_error`](https://guides.rubyonrails.org/association_basics.html#options-for-has-one-dependent).
|
|
Such objects should be removed explicitly ahead of time. Using `dependent: :restrict_with_error`
|
|
ensures that we forbid destroying the parent object if something is not cleaned up.
|
|
|
|
If all you need to do is clean up the child records themselves from PostgreSQL,
|
|
consider using [loose foreign keys](loose_foreign_keys.md).
|
|
|
|
## `config/database.yml`
|
|
|
|
GitLab is adding support to run multiple databases, for example to
|
|
[separate tables for the continuous integration features](https://gitlab.com/groups/gitlab-org/-/epics/6167)
|
|
from the main database. In order to prepare for this change, we
|
|
[validate the structure of the configuration](https://gitlab.com/gitlab-org/gitlab/-/merge_requests/67877)
|
|
in `database.yml` to ensure that only known databases are used.
|
|
|
|
Previously, the `config/database.yml` looked like this:
|
|
|
|
```yaml
|
|
production:
|
|
adapter: postgresql
|
|
encoding: unicode
|
|
database: gitlabhq_production
|
|
...
|
|
```
|
|
|
|
With the support for many databases this
|
|
syntax is [deprecated](https://gitlab.com/gitlab-org/gitlab/-/issues/338182)
|
|
and will be removed in [15.0](https://gitlab.com/gitlab-org/gitlab/-/issues/338182).
|
|
|
|
The new `config/database.yml` needs to include a database name
|
|
to define a database configuration. Only `main:` and `ci:` database
|
|
names are supported. The `main:` database must always be a first
|
|
entry in a hash. This change applies to decomposed and non-decomposed
|
|
change. If an invalid or deprecated syntax is used the error
|
|
or warning is printed during application start.
|
|
|
|
```yaml
|
|
# Non-decomposed database
|
|
production:
|
|
main:
|
|
adapter: postgresql
|
|
encoding: unicode
|
|
database: gitlabhq_production
|
|
...
|
|
|
|
# Decomposed database
|
|
production:
|
|
main:
|
|
adapter: postgresql
|
|
encoding: unicode
|
|
database: gitlabhq_production
|
|
...
|
|
ci:
|
|
adapter: postgresql
|
|
encoding: unicode
|
|
database: gitlabhq_production_ci
|
|
...
|
|
```
|
|
|
|
## Foreign keys that cross databases
|
|
|
|
There are many places where we use foreign keys that reference across the two
|
|
databases. This is not possible to do with two separate PostgreSQL
|
|
databases, so we need to replicate the behavior we get from PostgreSQL in a
|
|
performant way. We can't, and shouldn't, try to replicate the data guarantees
|
|
given by PostgreSQL which prevent creating invalid references, but we still need a
|
|
way to replace cascading deletes so we don't end up with orphaned data
|
|
or records that point to nowhere, which might lead to bugs. As such we created
|
|
["loose foreign keys"](loose_foreign_keys.md) which is an asynchronous
|
|
process of cleaning up orphaned records.
|