488 lines
26 KiB
Markdown
488 lines
26 KiB
Markdown
---
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stage: Enablement
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group: Global Search
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info: To determine the technical writer assigned to the Stage/Group associated with this page, see https://about.gitlab.com/handbook/engineering/ux/technical-writing/#assignments
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---
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# Elasticsearch knowledge **(PREMIUM SELF)**
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This area is to maintain a compendium of useful information when working with Elasticsearch.
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Information on how to enable Elasticsearch and perform the initial indexing is in
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the [Elasticsearch integration documentation](../integration/elasticsearch.md#enabling-advanced-search).
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## Deep Dive
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In June 2019, Mario de la Ossa hosted a Deep Dive (GitLab team members only: `https://gitlab.com/gitlab-org/create-stage/issues/1`) on the GitLab [Elasticsearch integration](../integration/elasticsearch.md) to share his domain specific knowledge with anyone who may work in this part of the codebase in the future. You can find the <i class="fa fa-youtube-play youtube" aria-hidden="true"></i> [recording on YouTube](https://www.youtube.com/watch?v=vrvl-tN2EaA), and the slides on [Google Slides](https://docs.google.com/presentation/d/1H-pCzI_LNrgrL5pJAIQgvLX8Ji0-jIKOg1QeJQzChug/edit) and in [PDF](https://gitlab.com/gitlab-org/create-stage/uploads/c5aa32b6b07476fa8b597004899ec538/Elasticsearch_Deep_Dive.pdf). Everything covered in this deep dive was accurate as of GitLab 12.0, and while specific details may have changed since then, it should still serve as a good introduction.
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In August 2020, a second Deep Dive was hosted, focusing on [GitLab-specific architecture for multi-indices support](#zero-downtime-reindexing-with-multiple-indices). The <i class="fa fa-youtube-play youtube" aria-hidden="true"></i> [recording on YouTube](https://www.youtube.com/watch?v=0WdPR9oB2fg) and the [slides](https://lulalala.gitlab.io/gitlab-elasticsearch-deepdive/) are available. Everything covered in this deep dive was accurate as of GitLab 13.3.
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## Supported Versions
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See [Version Requirements](../integration/elasticsearch.md#version-requirements).
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Developers making significant changes to Elasticsearch queries should test their features against all our supported versions.
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## Setting up development environment
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See the [Elasticsearch GDK setup instructions](https://gitlab.com/gitlab-org/gitlab-development-kit/blob/master/doc/howto/elasticsearch.md)
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## Helpful Rake tasks
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- `gitlab:elastic:test:index_size`: Tells you how much space the current index is using, as well as how many documents are in the index.
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- `gitlab:elastic:test:index_size_change`: Outputs index size, reindexes, and outputs index size again. Useful when testing improvements to indexing size.
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Additionally, if you need large repositories or multiple forks for testing, please consider [following these instructions](rake_tasks.md#extra-project-seed-options)
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## How does it work?
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The Elasticsearch integration depends on an external indexer. We ship an [indexer written in Go](https://gitlab.com/gitlab-org/gitlab-elasticsearch-indexer). The user must trigger the initial indexing via a Rake task but, after this is done, GitLab itself will trigger reindexing when required via `after_` callbacks on create, update, and destroy that are inherited from [`/ee/app/models/concerns/elastic/application_versioned_search.rb`](https://gitlab.com/gitlab-org/gitlab/blob/master/ee/app/models/concerns/elastic/application_versioned_search.rb).
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After initial indexing is complete, create, update, and delete operations for all models except projects (see [#207494](https://gitlab.com/gitlab-org/gitlab/-/issues/207494)) are tracked in a Redis [`ZSET`](https://redis.io/topics/data-types#sorted-sets). A regular `sidekiq-cron` `ElasticIndexBulkCronWorker` processes this queue, updating many Elasticsearch documents at a time with the [Bulk Request API](https://www.elastic.co/guide/en/elasticsearch/reference/current/docs-bulk.html).
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Search queries are generated by the concerns found in [`ee/app/models/concerns/elastic`](https://gitlab.com/gitlab-org/gitlab/tree/master/ee/app/models/concerns/elastic). These concerns are also in charge of access control, and have been a historic source of security bugs so please pay close attention to them!
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## Existing Analyzers/Tokenizers/Filters
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These are all defined in [`ee/lib/elastic/latest/config.rb`](https://gitlab.com/gitlab-org/gitlab/blob/master/ee/lib/elastic/latest/config.rb)
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### Analyzers
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#### `path_analyzer`
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Used when indexing blobs' paths. Uses the `path_tokenizer` and the `lowercase` and `asciifolding` filters.
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Please see the `path_tokenizer` explanation below for an example.
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#### `sha_analyzer`
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Used in blobs and commits. Uses the `sha_tokenizer` and the `lowercase` and `asciifolding` filters.
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Please see the `sha_tokenizer` explanation later below for an example.
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#### `code_analyzer`
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Used when indexing a blob's filename and content. Uses the `whitespace` tokenizer and the filters: [`code`](#code), `lowercase`, and `asciifolding`
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The `whitespace` tokenizer was selected in order to have more control over how tokens are split. For example the string `Foo::bar(4)` needs to generate tokens like `Foo` and `bar(4)` in order to be properly searched.
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Please see the `code` filter for an explanation on how tokens are split.
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NOTE:
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The [Elasticsearch code_analyzer doesn't account for all code cases](../integration/elasticsearch.md#elasticsearch-code_analyzer-doesnt-account-for-all-code-cases).
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#### `code_search_analyzer`
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Not directly used for indexing, but rather used to transform a search input. Uses the `whitespace` tokenizer and the `lowercase` and `asciifolding` filters.
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### Tokenizers
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#### `sha_tokenizer`
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This is a custom tokenizer that uses the [`edgeNGram` tokenizer](https://www.elastic.co/guide/en/elasticsearch/reference/5.5/analysis-edgengram-tokenizer.html) to allow SHAs to be searchable by any sub-set of it (minimum of 5 chars).
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Example:
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`240c29dc7e` becomes:
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- `240c2`
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- `240c29`
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- `240c29d`
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- `240c29dc`
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- `240c29dc7`
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- `240c29dc7e`
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#### `path_tokenizer`
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This is a custom tokenizer that uses the [`path_hierarchy` tokenizer](https://www.elastic.co/guide/en/elasticsearch/reference/5.5/analysis-pathhierarchy-tokenizer.html) with `reverse: true` in order to allow searches to find paths no matter how much or how little of the path is given as input.
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Example:
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`'/some/path/application.js'` becomes:
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- `'/some/path/application.js'`
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- `'some/path/application.js'`
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- `'path/application.js'`
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- `'application.js'`
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### Filters
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#### `code`
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Uses a [Pattern Capture token filter](https://www.elastic.co/guide/en/elasticsearch/reference/5.5/analysis-pattern-capture-tokenfilter.html) to split tokens into more easily searched versions of themselves.
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Patterns:
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- `"(\\p{Ll}+|\\p{Lu}\\p{Ll}+|\\p{Lu}+)"`: captures CamelCased and lowedCameCased strings as separate tokens
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- `"(\\d+)"`: extracts digits
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- `"(?=([\\p{Lu}]+[\\p{L}]+))"`: captures CamelCased strings recursively. Ex: `ThisIsATest` => `[ThisIsATest, IsATest, ATest, Test]`
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- `'"((?:\\"|[^"]|\\")*)"'`: captures terms inside quotes, removing the quotes
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- `"'((?:\\'|[^']|\\')*)'"`: same as above, for single-quotes
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- `'\.([^.]+)(?=\.|\s|\Z)'`: separate terms with periods in-between
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- `'([\p{L}_.-]+)'`: some common chars in file names to keep the whole filename intact (for example `my_file-ñame.txt`)
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- `'([\p{L}\d_]+)'`: letters, numbers and underscores are the most common tokens in programming. Always capture them greedily regardless of context.
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## Gotchas
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- Searches can have their own analyzers. Remember to check when editing analyzers
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- `Character` filters (as opposed to token filters) always replace the original character, so they're not a good choice as they can hinder exact searches
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## Zero downtime reindexing with multiple indices
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NOTE:
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This is not applicable yet as multiple indices functionality is not fully implemented.
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Currently GitLab can only handle a single version of setting. Any setting/schema changes would require reindexing everything from scratch. Since reindexing can take a long time, this can cause search functionality downtime.
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To avoid downtime, GitLab is working to support multiple indices that
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can function at the same time. Whenever the schema changes, the admin
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will be able to create a new index and reindex to it, while searches
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continue to go to the older, stable index. Any data updates will be
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forwarded to both indices. Once the new index is ready, an admin can
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mark it active, which will direct all searches to it, and remove the old
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index.
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This is also helpful for migrating to new servers, e.g. moving to/from AWS.
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Currently we are on the process of migrating to this new design. Everything is hardwired to work with one single version for now.
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### Architecture
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The traditional setup, provided by `elasticsearch-rails`, is to communicate through its internal proxy classes. Developers would write model-specific logic in a module for the model to include in (e.g. `SnippetsSearch`). The `__elasticsearch__` methods would return a proxy object, e.g.:
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- `Issue.__elasticsearch__` returns an instance of `Elasticsearch::Model::Proxy::ClassMethodsProxy`
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- `Issue.first.__elasticsearch__` returns an instance of `Elasticsearch::Model::Proxy::InstanceMethodsProxy`.
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These proxy objects would talk to Elasticsearch server directly (see top half of the diagram).
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![Elasticsearch Architecture](img/elasticsearch_architecture.svg)
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In the planned new design, each model would have a pair of corresponding sub-classed proxy objects, in which model-specific logic is located. For example, `Snippet` would have `SnippetClassProxy` and `SnippetInstanceProxy` (being subclass of `Elasticsearch::Model::Proxy::ClassMethodsProxy` and `Elasticsearch::Model::Proxy::InstanceMethodsProxy`, respectively).
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`__elasticsearch__` would represent another layer of proxy object, keeping track of multiple actual proxy objects. It would forward method calls to the appropriate index. For example:
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- `model.__elasticsearch__.search` would be forwarded to the one stable index, since it is a read operation.
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- `model.__elasticsearch__.update_document` would be forwarded to all indices, to keep all indices up-to-date.
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The global configurations per version are now in the `Elastic::(Version)::Config` class. You can change mappings there.
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### Creating new version of schema
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NOTE:
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This is not applicable yet as multiple indices functionality is not fully implemented.
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Folders like `ee/lib/elastic/v12p1` contain snapshots of search logic from different versions. To keep a continuous Git history, the latest version lives under `ee/lib/elastic/latest`, but its classes are aliased under an actual version (e.g. `ee/lib/elastic/v12p3`). When referencing these classes, never use the `Latest` namespace directly, but use the actual version (e.g. `V12p3`).
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The version name basically follows the GitLab release version. If setting is changed in 12.3, we will create a new namespace called `V12p3` (p stands for "point"). Raise an issue if there is a need to name a version differently.
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If the current version is `v12p1`, and we need to create a new version for `v12p3`, the steps are as follows:
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1. Copy the entire folder of `v12p1` as `v12p3`
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1. Change the namespace for files under `v12p3` folder from `V12p1` to `V12p3` (which are still aliased to `Latest`)
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1. Delete `v12p1` folder
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1. Copy the entire folder of `latest` as `v12p1`
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1. Change the namespace for files under `v12p1` folder from `Latest` to `V12p1`
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1. Make changes to files under the `latest` folder as needed
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## Creating a new Advanced Search migration
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> This functionality was introduced by [#234046](https://gitlab.com/gitlab-org/gitlab/-/issues/234046).
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NOTE:
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This only supported for indices created with GitLab 13.0 or greater.
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Migrations are stored in the [`ee/elastic/migrate/`](https://gitlab.com/gitlab-org/gitlab/-/tree/master/ee/elastic/migrate) folder with `YYYYMMDDHHMMSS_migration_name.rb`
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filename format, which is similar to Rails database migrations:
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```ruby
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# frozen_string_literal: true
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class MigrationName < Elastic::Migration
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# Important: Any update to the Elastic index mappings should be replicated in Elastic::Latest::Config
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def migrate
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end
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# Check if the migration has completed
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# Return true if completed, otherwise return false
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def completed?
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end
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end
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```
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Applied migrations are stored in `gitlab-#{RAILS_ENV}-migrations` index. All migrations not executed
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are applied by the [`Elastic::MigrationWorker`](https://gitlab.com/gitlab-org/gitlab/blob/master/ee/app/workers/elastic/migration_worker.rb)
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cron worker sequentially.
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Any update to the Elastic index mappings should be replicated in [`Elastic::Latest::Config`](https://gitlab.com/gitlab-org/gitlab/-/blob/master/ee/lib/elastic/latest/config.rb).
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Migrations can be built with a retry limit and have the ability to be [failed and marked as halted](https://gitlab.com/gitlab-org/gitlab/-/blob/66e899b6637372a4faf61cfd2f254cbdd2fb9f6d/ee/lib/elastic/migration.rb#L40).
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Any data or index cleanup needed to support migration retries should be handled within the migration.
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### Migration options supported by the `Elastic::MigrationWorker`
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[`Elastic::MigrationWorker`](https://gitlab.com/gitlab-org/gitlab/blob/master/ee/app/workers/elastic/migration_worker.rb) supports the following migration options:
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- `batched!` - Allow the migration to run in batches. If set, the [`Elastic::MigrationWorker`](https://gitlab.com/gitlab-org/gitlab/blob/master/ee/app/workers/elastic/migration_worker.rb)
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will re-enqueue itself with a delay which is set using the `throttle_delay` option described below. The batching
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must be handled within the `migrate` method, this setting controls the re-enqueuing only.
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- `throttle_delay` - Sets the wait time in between batch runs. This time should be set high enough to allow each migration batch
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enough time to finish. Additionally, the time should be less than 30 minutes since that is how often the
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[`Elastic::MigrationWorker`](https://gitlab.com/gitlab-org/gitlab/blob/master/ee/app/workers/elastic/migration_worker.rb)
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cron worker runs. Default value is 5 minutes.
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- `pause_indexing!` - Pause indexing while the migration runs. This setting will record the indexing setting before
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the migration runs and set it back to that value when the migration is completed.
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```ruby
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# frozen_string_literal: true
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class BatchedMigrationName < Elastic::Migration
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# Declares a migration should be run in batches
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batched!
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throttle_delay 10.minutes
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# ...
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end
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```
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### Multi-version compatibility
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These Advanced Search migrations, like any other GitLab changes, need to support the case where
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[multiple versions of the application are running at the same time](multi_version_compatibility.md).
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Depending on the order of deployment, it's possible that the migration
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has started or finished and there's still a server running the application code from before the
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migration. We need to take this into consideration until we can [ensure all Advanced Search migrations
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start after the deployment has finished](https://gitlab.com/gitlab-org/gitlab/-/issues/321619).
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### Reverting a migration
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Because Elasticsearch does not support transactions, we always need to design our
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migrations to accommodate a situation where the application
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code is reverted after the migration has started or after it is finished.
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For this reason we generally defer destructive actions (for example, deletions after
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some data is moved) to a later merge request after the migrations have
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completed successfully. To be safe, for self-managed customers we should also
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defer it to another release if there is risk of important data loss.
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### Best practices for Advanced Search migrations
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Follow these best practices for best results:
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- When working in batches, keep the batch size under 9,000 documents
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and `throttle_delay` over 3 minutes. The bulk indexer is set to run
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every 1 minute and process a batch of 10,000 documents. These limits
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allow the bulk indexer time to process records before another migration
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batch is attempted.
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- To ensure that document counts are up to date, it is recommended to refresh
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the index before checking if a migration is completed.
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- Add logging statements to each migration when the migration starts, when a
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completion check occurs, and when the migration is completed. These logs
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are helpful when debugging issues with migrations.
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- Pause indexing if you're using any Elasticsearch Reindex API operations.
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- Consider adding a retry limit if there is potential for the migration to fail.
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This ensures that migrations can be halted if an issue occurs.
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## Deleting Advanced Search migrations in a major version upgrade
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Since our Advanced Search migrations usually require us to support multiple
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code paths for a long period of time, it's important to clean those up when we
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safely can.
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We choose to use GitLab major version upgrades as a safe time to remove
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backwards compatibility for indices that have not been fully migrated. We
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[document this in our upgrade
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documentation](../update/index.md#upgrading-to-a-new-major-version). We also
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choose to remove the migration code and tests so that:
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- We don't need to maintain any code that is called from our Advanced Search
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migrations.
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- We don't waste CI time running tests for migrations that we don't support
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anymore.
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To be extra safe, we will not delete migrations that were created in the last
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minor version before the major upgrade. So, if the we are upgrading to `%14.0`,
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we should not delete migrations that were only added in `%13.11`. This is an
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extra safety net as we expect there are migrations that get merged that may
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take multiple weeks to finish on GitLab.com. It would be bad if we upgraded
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GitLab.com to `%14.0` before the migrations in `%13.11` were finished. Since
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our deployments to GitLab.com are automated and we currently don't have
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automated checks to prevent this, the extra precaution is warranted.
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Additionally, even if we did have automated checks to prevent it, we wouldn't
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actually want to hold up GitLab.com deployments on Advanced Search migrations,
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as they may still have another week to go, and that's too long to block
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deployments.
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### Process for removing migrations
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For every migration that was created 2 minor versions before the major version
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being upgraded to, we do the following:
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1. Confirm the migration has actually completed successfully for GitLab.com.
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1. Replace the content of `migrate` and `completed?` methods as follows:
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```ruby
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def migrate
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log_raise "Migration has been deleted in the last major version upgrade." \
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"Migrations are supposed to be finished before upgrading major version https://docs.gitlab.com/ee/update/#upgrading-to-a-new-major-version ." \
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"In order to correct this issue you will need to reacreate your index from scratch https://docs.gitlab.com/ee/integration/elasticsearch.html#last-resort-to-recreate-an-index ."
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end
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def completed?
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false
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end
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```
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1. Delete any spec files to support this migration.
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1. Remove any logic handling backwards compatibility for this migration. You
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can find this by looking for
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`Elastic::DataMigrationService.migration_has_finished?(:migration_name_in_lowercase)`.
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1. Create a merge request with these changes. Noting that we should not
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accidentally merge this before the major release is started.
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## Performance Monitoring
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### Prometheus
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GitLab exports [Prometheus
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metrics](../administration/monitoring/prometheus/gitlab_metrics.md) relating to
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the number of requests and timing for all web/API requests and Sidekiq jobs,
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which can help diagnose performance trends and compare how Elasticsearch timing
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is impacting overall performance relative to the time spent doing other things.
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#### Indexing queues
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GitLab also exports [Prometheus
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metrics](../administration/monitoring/prometheus/gitlab_metrics.md) for
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indexing queues, which can help diagnose performance bottlenecks and determine
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whether or not your GitLab instance or Elasticsearch server can keep up with
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the volume of updates.
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### Logs
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All of the indexing happens in Sidekiq, so much of the relevant logs for the
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Elasticsearch integration can be found in
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[`sidekiq.log`](../administration/logs.md#sidekiqlog). In particular, all
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Sidekiq workers that make requests to Elasticsearch in any way will log the
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number of requests and time taken querying/writing to Elasticsearch. This can
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be useful to understand whether or not your cluster is keeping up with
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indexing.
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Searching Elasticsearch is done via ordinary web workers handling requests. Any
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requests to load a page or make an API request, which then make requests to
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Elasticsearch, will log the number of requests and the time taken to
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[`production_json.log`](../administration/logs.md#production_jsonlog). These
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logs will also include the time spent on Database and Gitaly requests, which
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may help to diagnose which part of the search is performing poorly.
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There are additional logs specific to Elasticsearch that are sent to
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[`elasticsearch.log`](../administration/logs.md#elasticsearchlog)
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that may contain information to help diagnose performance issues.
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### Performance Bar
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Elasticsearch requests will be displayed in the [`Performance
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Bar`](../administration/monitoring/performance/performance_bar.md), which can
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be used both locally in development and on any deployed GitLab instance to
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diagnose poor search performance. This will show the exact queries being made,
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which is useful to diagnose why a search might be slow.
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### Correlation ID and `X-Opaque-Id`
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Our [correlation
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ID](distributed_tracing.md#developer-guidelines-for-working-with-correlation-ids)
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is forwarded by all requests from Rails to Elasticsearch as the
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[`X-Opaque-Id`](https://www.elastic.co/guide/en/elasticsearch/reference/current/tasks.html#_identifying_running_tasks)
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header which allows us to track any
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[tasks](https://www.elastic.co/guide/en/elasticsearch/reference/current/tasks.html)
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in the cluster back the request in GitLab.
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## Troubleshooting
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### Getting `flood stage disk watermark [95%] exceeded`
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You might get an error such as
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```plaintext
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[2018-10-31T15:54:19,762][WARN ][o.e.c.r.a.DiskThresholdMonitor] [pval5Ct]
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flood stage disk watermark [95%] exceeded on
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[pval5Ct7SieH90t5MykM5w][pval5Ct][/usr/local/var/lib/elasticsearch/nodes/0] free: 56.2gb[3%],
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all indices on this node will be marked read-only
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```
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This is because you've exceeded the disk space threshold - it thinks you don't have enough disk space left, based on the default 95% threshold.
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In addition, the `read_only_allow_delete` setting will be set to `true`. It will block indexing, `forcemerge`, etc
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|
|
```shell
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curl "http://localhost:9200/gitlab-development/_settings?pretty"
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```
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Add this to your `elasticsearch.yml` file:
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|
|
```yaml
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# turn off the disk allocator
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cluster.routing.allocation.disk.threshold_enabled: false
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```
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|
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_or_
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|
|
|
```yaml
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# set your own limits
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cluster.routing.allocation.disk.threshold_enabled: true
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cluster.routing.allocation.disk.watermark.flood_stage: 5gb # ES 6.x only
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cluster.routing.allocation.disk.watermark.low: 15gb
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cluster.routing.allocation.disk.watermark.high: 10gb
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```
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Restart Elasticsearch, and the `read_only_allow_delete` will clear on its own.
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|
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|
_from "Disk-based Shard Allocation | Elasticsearch Reference" [5.6](https://www.elastic.co/guide/en/elasticsearch/reference/5.6/disk-allocator.html#disk-allocator) and [6.x](https://www.elastic.co/guide/en/elasticsearch/reference/6.7/disk-allocator.html)_
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### Disaster recovery/data loss/backups
|
|
|
|
The use of Elasticsearch in GitLab is only ever as a secondary data store.
|
|
This means that all of the data stored in Elasticsearch can always be derived
|
|
again from other data sources, specifically PostgreSQL and Gitaly. Therefore if
|
|
the Elasticsearch data store is ever corrupted for whatever reason you can
|
|
simply reindex everything from scratch.
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|
|
|
If your Elasticsearch index is incredibly large it may be too time consuming or
|
|
cause too much downtime to reindex from scratch. There aren't any built in
|
|
mechanisms for automatically finding discrepancies and resyncing an
|
|
Elasticsearch index if it gets out of sync but one tool that may be useful is
|
|
looking at the logs for all the updates that occurred in a time range you
|
|
believe may have been missed. This information is very low level and only
|
|
useful for operators that are familiar with the GitLab codebase. It is
|
|
documented here in case it is useful for others. The relevant logs that could
|
|
theoretically be used to figure out what needs to be replayed are:
|
|
|
|
1. All non-repository updates that were synced can be found in
|
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[`elasticsearch.log`](../administration/logs.md#elasticsearchlog) by
|
|
searching for
|
|
[`track_items`](https://gitlab.com/gitlab-org/gitlab/-/blob/1e60ea99bd8110a97d8fc481e2f41cab14e63d31/ee/app/services/elastic/process_bookkeeping_service.rb#L25)
|
|
and these can be replayed by sending these items again through
|
|
`::Elastic::ProcessBookkeepingService.track!`
|
|
1. All repository updates that occurred can be found in
|
|
[`elasticsearch.log`](../administration/logs.md#elasticsearchlog) by
|
|
searching for
|
|
[`indexing_commit_range`](https://gitlab.com/gitlab-org/gitlab/-/blob/6f9d75dd3898536b9ec2fb206e0bd677ab59bd6d/ee/lib/gitlab/elastic/indexer.rb#L41).
|
|
Replaying these requires resetting the
|
|
[`IndexStatus#last_commit/last_wiki_commit`](https://gitlab.com/gitlab-org/gitlab/-/blob/master/ee/app/models/index_status.rb)
|
|
to the oldest `from_sha` in the logs and then triggering another index of
|
|
the project using
|
|
[`ElasticCommitIndexerWorker`](https://gitlab.com/gitlab-org/gitlab/-/blob/master/ee/app/workers/elastic_commit_indexer_worker.rb)
|
|
1. All project deletes that occurred can be found in
|
|
[`sidekiq.log`](../administration/logs.md#sidekiqlog) by searching for
|
|
[`ElasticDeleteProjectWorker`](https://gitlab.com/gitlab-org/gitlab/-/blob/master/ee/app/workers/elastic_delete_project_worker.rb).
|
|
These updates can be replayed by triggering another
|
|
`ElasticDeleteProjectWorker`.
|
|
|
|
With the above methods and taking regular [Elasticsearch
|
|
snapshots](https://www.elastic.co/guide/en/elasticsearch/reference/current/snapshot-restore.html)
|
|
we should be able to recover from different kinds of data loss issues in a
|
|
relatively short period of time compared to indexing everything from
|
|
scratch.
|