146 lines
6.6 KiB
Ruby
146 lines
6.6 KiB
Ruby
# frozen_string_literal: true
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module Gitlab
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module Database
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module PostgresHll
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# For large tables, PostgreSQL can take a long time to count rows due to MVCC.
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# Implements a distinct batch counter based on HyperLogLog algorithm
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# Needs indexes on the column below to calculate max, min and range queries
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# For larger tables just set higher batch_size with index optimization
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#
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# In order to not use a possible complex time consuming query when calculating min and max values,
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# the start and finish can be sent specifically, start and finish should contain max and min values for PRIMARY KEY of
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# relation (most cases `id` column) rather than counted attribute eg:
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# estimate_distinct_count(start: ::Project.aimed_for_deletion.minimum(:id), finish: ::Project.aimed_for_deletion.maximum(:id))
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#
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# Grouped relations are NOT supported yet.
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#
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# @example Usage
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# ::Gitlab::Database::PostgresHllBatchDistinctCount.new(::Project, :creator_id).execute
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# ::Gitlab::Database::PostgresHllBatchDistinctCount.new(::Project.aimed_for_deletion.service_desk_enabled.where(time_period))
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# .execute(
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# batch_size: 1_000,
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# start: ::Project.aimed_for_deletion.service_desk_enabled.where(time_period).minimum(:id),
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# finish: ::Project.aimed_for_deletion.service_desk_enabled.where(time_period).maximum(:id)
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# )
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#
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# @note HyperLogLog is an PROBABILISTIC algorithm that ESTIMATES distinct count of given attribute value for supplied relation
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# Like all probabilistic algorithm is has ERROR RATE margin, that can affect values,
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# for given implementation no higher value was reported (https://gitlab.com/gitlab-org/gitlab/-/merge_requests/45673#accuracy-estimation) than 5.3%
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# for the most of a cases this value is lower. However, if the exact value is necessary other tools has to be used.
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class BatchDistinctCounter
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ERROR_RATE = 4.9 # max encountered empirical error rate, used in tests
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MIN_REQUIRED_BATCH_SIZE = 750
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SLEEP_TIME_IN_SECONDS = 0.01 # 10 msec sleep
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MAX_DATA_VOLUME = 4_000_000_000
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# Each query should take < 500ms https://gitlab.com/gitlab-org/gitlab/-/merge_requests/22705
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DEFAULT_BATCH_SIZE = 10_000
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ZERO_OFFSET = 1
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BUCKET_ID_MASK = (Buckets::TOTAL_BUCKETS - ZERO_OFFSET).to_s(2)
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BIT_31_MASK = "B'0#{'1' * 31}'"
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BIT_32_NORMALIZED_BUCKET_ID_MASK = "B'#{'0' * (32 - BUCKET_ID_MASK.size)}#{BUCKET_ID_MASK}'"
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WRONG_CONFIGURATION_ERROR = Class.new(ActiveRecord::StatementInvalid)
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def initialize(relation, column = nil)
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@relation = relation
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@column = column || relation.primary_key
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end
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# Executes counter that iterates over database source and return Gitlab::Database::PostgresHll::Buckets
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# that can be used to estimation of number of uniq elements in analysed set
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#
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# @param batch_size maximal number of rows that will be analysed by single database query
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# @param start initial pkey range
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# @param finish final pkey range
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# @return [Gitlab::Database::PostgresHll::Buckets] HyperLogLog data structure instance that can estimate number of unique elements
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def execute(batch_size: nil, start: nil, finish: nil)
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raise 'BatchCount can not be run inside a transaction' if ActiveRecord::Base.connection.transaction_open?
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batch_size ||= DEFAULT_BATCH_SIZE
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start = actual_start(start)
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finish = actual_finish(finish)
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raise WRONG_CONFIGURATION_ERROR if unwanted_configuration?(start, finish, batch_size)
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batch_start = start
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hll_buckets = Buckets.new
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while batch_start <= finish
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hll_buckets.merge_hash!(hll_buckets_for_batch(batch_start, batch_start + batch_size))
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batch_start += batch_size
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sleep(SLEEP_TIME_IN_SECONDS)
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end
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hll_buckets
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end
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private
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def unwanted_configuration?(start, finish, batch_size)
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batch_size <= MIN_REQUIRED_BATCH_SIZE ||
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(finish - start) >= MAX_DATA_VOLUME ||
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start > finish || start < 0 || finish < 0
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end
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def hll_buckets_for_batch(start, finish)
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@relation
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.connection
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.execute(bucketed_data_sql % { source_query: source_query(start, finish) })
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.map(&:values)
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.to_h
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end
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# Generate the source query SQL snippet for the provided id range
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#
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# @example SQL query template
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# SELECT CAST(('X' || md5(CAST(%{column} as text))) as bit(32)) attr_hash_32_bits
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# FROM %{relation}
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# WHERE %{pkey} >= %{batch_start} AND %{pkey} < %{batch_end}
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# AND %{column} IS NOT NULL
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#
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# @param start initial id range
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# @param finish final id range
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# @return [String] SQL query fragment
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def source_query(start, finish)
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col_as_arel = @column.is_a?(Arel::Attributes::Attribute) ? @column : Arel.sql(@column.to_s)
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col_as_text = Arel::Nodes::NamedFunction.new('CAST', [col_as_arel.as('text')])
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md5_of_col = Arel::Nodes::NamedFunction.new('md5', [col_as_text])
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md5_as_hex = Arel::Nodes::Concat.new(Arel.sql("'X'"), md5_of_col)
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bits = Arel::Nodes::NamedFunction.new('CAST', [md5_as_hex.as('bit(32)')])
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@relation
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.where(@relation.primary_key => (start...finish))
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.where(col_as_arel.not_eq(nil))
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.select(bits.as('attr_hash_32_bits')).to_sql
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end
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def actual_start(start)
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start || @relation.unscope(:group, :having).minimum(@relation.primary_key) || 0
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end
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def actual_finish(finish)
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finish || @relation.unscope(:group, :having).maximum(@relation.primary_key) || 0
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end
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# @example source_query
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# SELECT CAST(('X' || md5(CAST(%{column} as text))) as bit(32)) attr_hash_32_bits
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# FROM %{relation}
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# WHERE %{pkey} >= %{batch_start}
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# AND %{pkey} < %{batch_end}
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# AND %{column} IS NOT NULL
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def bucketed_data_sql
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<<~SQL
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WITH hashed_attributes AS #{Gitlab::Database::AsWithMaterialized.materialized_if_supported} (%{source_query})
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SELECT (attr_hash_32_bits & #{BIT_32_NORMALIZED_BUCKET_ID_MASK})::int AS bucket_num,
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(31 - floor(log(2, min((attr_hash_32_bits & #{BIT_31_MASK})::int))))::int as bucket_hash
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FROM hashed_attributes
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GROUP BY 1
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SQL
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end
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end
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end
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end
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end
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